Seven up

Email: Jonathan Weitzman - jonathanweitzman@hotmail.com
News from The Scientist 2003, 4(1):20030414-01

Published 14 April 2003

In the April 10 Sciencexpress, Stephen Scherer and colleagues report completion of the sequencing and annotation of human chromosome 7. The sequence is 158 megabases long, most of which comes from the Celera whole-genome scaffolds, combined with the public clone-based sequence (Sciencexpress, DOI:10.1126/science.1083423, April 10, 2003).

Scherer et al. integrated the chromosome 7 sequence with data from a number of database resources, particularly those related to human disease. Comparative analysis revealed a relatively small number of discrepancies with the NCBI chromosome 7 assembly. Comparison with the Celera mouse genome sequence led to the identification of around 22,000 syntenic anchor points. They identified 1917 gene structures, almost half of which correspond to known genes, with an average gene size of around 70 kb. There are 99 overlapping genes and 38 sense-antisense gene pairs and there is evidence for extensive intra-chromosomal duplications, some of which coincide with mouse synteny breaks or with human diseases.

Scherer et al. report that several human disorders, including susceptibility to autism and Williams-Beuren syndrome, may map to inversion breakpoints.



References

1.  [http://www.sciencexpress.org]
  S.W. Scherer et al., "Human Chromosome 7: DNA Sequence and Biology," Sciencexpress, DOI:10.1126/science.1083423, April 10, 2003.
Return to citation in text: [1]
 
2.  [http://www.celera.com]
  Celera
Return to citation in text: [1]
 
3.  [http://www.chr7.org]
  The Chromosome 7 Annotation Project
Return to citation in text: [1]
 


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