
Homme Hellinga
© Les Todd / Duke University
On a rainy morning at the National Institutes of Health campus in Bethesda, Md.,
last fall, Duke University biochemist Homme Hellinga took the stage to sum up what he
had been doing over the last 5 years with the $2.5 million Pioneer award he received in
2004. Unlike other NIH grants that require a strict game plan with concrete goals, the
Pioneer award is a kind of no-strings-attached slush fund to encourage
“high-risk, high-impact research.” Hellinga and his cohort had come
to report on their findings and experiences.
Hellinga’s grey waves of hair encircle a cherubic face just beginning
to show its age. As many in the audience were no doubt aware, he was currently the
subject of a Duke investigation into research misconduct after two pioneering papers on
computational enzyme design were retracted in 2008. But as he began speaking that
Friday, he knew another controversy was about to unfold. “This is a
bittersweet moment,” Hellinga said before proceeding with his talk.
“It’s been 5 years of a very interesting journey.”
In October, just weeks after Hellinga’s speech, Birte Höcker and
colleagues at the Max Planck Institute for Developmental Biology in Germany published a
paper in the Proceedings of the National Academy of Sciences disputing the
conclusions of Hellinga’s high-profile studies on ligand-binding proteins,
which appeared in Nature in 2003 and PNAS in 2004. The
original papers reported that Hellinga’s team modified several proteins from
E. coli in order to accept, for instance, the explosive TNT, instead of
the sugars to which they normally bind—a first step to designing novel
biosensors and enzymes. But Höcker’s group found that none of the designed
proteins were bound to ligands as expected. In a statement after the paper was released,
Hellinga said his group would investigate the discrepancies.
While no one has alleged misconduct with respect to these papers, questions
linger about the earlier retractions. Hellinga was the senior author of a celebrated
Science paper in 2004, claiming his team had been the first to design
and synthesize a novel enzyme, called novoTIM. Hellinga later retracted it along with a
follow-up paper in another journal. Initially, he directed the blame at his student,
lead author Mary Dwyer, whom Duke investigated and cleared of research misconduct. Then,
as his own behavior came under scrutiny from his critics, he publicly invited Duke to
begin an investigation of his role in the disputed work. (Hellinga failed to return
calls for comment for this article.)
Many unanswered questions remain about one high- profile scientist’s
research.
Students say they are irritated by the plodding progress of the misconduct
investigation, which is now apparently in its 20th month. (In 2007, institutions took an
average of 12 months to wrap up cases after notifying the Office of Research Integrity
of the investigations.) “I think a lot of people here have been through so
much they want to see things resolved,” says graduate student Jeremy Bloch. A
former student still working in the department (who declined to be named) shared
Bloch’s sentiment, noting that, “A tense meeting [in September]
resulted in a lot of students speaking out about the administration’s
inability to do anything about Hellinga’s treatment of Dwyer.”
Last year, when I spoke with him, Hellinga seemed to want to make amends with
Dwyer, describing her as “a very strong graduate student.”
At the Pioneer symposium, Hellinga focused on an automated process to make
proteins, a procedure that was first described in his 2007 paper in Protein
Science (16:379–90). He made no mention of the recently disputed
papers, nor did he talk about the nine other ligand-binding papers published since.