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Wenche Eikrem and Jahn Throndsen / University of Oslo
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The paper:
E. Derelle et. al., "Genome analysis of the smallest free-living eukaryote
Ostreococcus tauri unveils many unique features," Proc Natl
Acad Sci, 103:11647-52, 2006. (Cited in 74 papers)
The study:
French, Belgian, and US scientists sequenced the genome of Ostreococcus
tauri, an ancient species of green algae at the base of the green plant
lineage and the marine food chain. Its phylogenetic position gave insight into the
divergence between plant and animal lineages since it shared gene homologies to
both, says Arthur Grossman, at Stanford University, who was not involved in the
study.
The surprise:
O. tauri's strikingly compact genome, with just one region of
reduplication, contained unexpected evidence of complexity in the form of two
heterogenous chromosomes, says Alexandra Worden of Stanford University, an author on
the study.
The details:
Two of O. tauri's 18 chromosomes carry most of the genome's
transposons; one of them, C2, contains sole copies of essential housekeeping genes.
The intron and gene content of C2 suggested it may be a sex chromosome. Related
species of algae sequenced since also have such oddball chromosomes, pointing to a
common speciation mechanism, says Pierre Rouzé of Ghent University and lead author.
The follow-up:
Comparing the tiny O. tauri genome to O.
lucimarinus, an open ocean alga sequenced the following year, and other
related species is shedding light on the evolution of environment-specific features
such as metabolism.
| Genome comparisons |
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Genome size (Mbp)
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No. of protein encoding genes
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Gene density (No. of genes/Mbp)
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| Ostreococcus tauri |
12.56 |
8,166 |
650 |
| Saccharomyces cerevisiae |
12.15 |
6,607 |
543 |
| Arabidopsis thaliana |
140 |
27,000 |
193 |